Mid-2009 MBP Has Been Hard Freezing, I think it may be the SSD or software?

Please read this fully so you don't end up suggesting something I've already tried.
I have the Mid-2009 version of the 13" MBP that I received in December 2009. Almost two years ago, I upgraded it to8 GB of RAM and a 256 GB SSD. Everything has been running smoothly until about 2 or so weeks ago. My computer has been having hard freezes, meaning, it's not simply an application freezing up; force quit doesn't work, the clock stops ticking, the whole system freezes. It was very predictable too. Whether i was watching youtube videos with flash, reading online articles without it (I have ad block) or doing something completely non-flash or web related, my computer would hard freeze after about an hour or two or so of use, requiring a hard reset (holding the power button until it turned off and then restarting).
I did some research on this and from what I initially found I thought it was problems with the motherboard. However, I found that to be odd because my motherboard was replaced by Apple in September 2012. I read somewhere to try a system hardware diagnostic test (press D upon start up). On the short hardware test, the one that only takes a few minutes, it passed without any problems. Then I tried the longer hardware test, the one that says takes more than an hour. I put that one on and left it alone. I came back every so often and checked on it and it was fine at first. The mouse responded and the test was showing some measurable progress. However I came back, and at 2 hours 11 minutes and 59 seconds into the hardware test, it froze without completing it.
Then I tried doing something everyone says to do when anything happens: I repaired disk permissions. I did that, and according to Disk utility everything went rather swimmingly. However, that didn't fix anything,in fact, it made things slightly worse. Ever since I reset disk permissions, everytime I open Safari, it freezes immediately, and that has only happened since I repaired disk permissions. My home page is about:blank, if anyone was wondering. I've only discovered this happening with Safari as of now. I switched Chrome as my primary web browser for now.
Being the resourceful person I am, I tried to isolate the problem. My sister, luckily, has an identical MBP. First, using target disk on my computer, I booted my SSD onto her computer - this is to see if the problem was HDD/SSD related or motherboard related. When I booted my SSD onto her computer the same problems occurred: Safari froze upon start up, and then computer would hard freeze after about two hours. However, when I booted her HDD onto my computer via target disk, there were no problems. Safari opened just fine and I used her computer for several hours without issue.
At this point, I was pretty sure it was the SSD, but I thought it was possibly a bad Sata cable or something. But nope. Last night, I switched harddrives completely. No target Disk. I put my SSD in her computer and put her HDD in my computer. I got the same results as target disk. It can't be the motherboard or memory, because both computers worked fine with my sisters harddrive. Only the computer booted off of the SSD would have these problems.
At this point I think it could be two possibilities
A) Either the SSD itself is starting to become defective
B) Some software component of my SSD is buggy
I think it could be something software related because why would Safari and safari only freeze after launch, but no other apps? Also something of note, these problems were happening, I tried to see if doing anything with software update would help, updated everything that needed to be updated, and these problems still occurred.
What do you guys think? anyone have an idea of what it could be? Any suggestions of how I handle this? Applecare is expired. I'm considering doing a clean install but I'm not fully backed up yet and I don't want to waste my time and have it not work. But I also don't want to buy a new hard drive or SSD and have it do the same things. And I'm not getting a new computer if the only problem with it is contained within the storage unit, whether that problem is within the software or hardware related.
Responses and suggestions would be highly appreciated, thanks.
EDIT: this information may be of interest: currently have 19.51 GB of available space (out of 256 GB). At one point, about a month and a half or so ago, my storage was as low as 9 or so GB free.
I am running OSX 10.6.8

I have tried making a new user account like you suggested. It fixed the Safari problem; Safari opened and played video just fine. However, the computer still hard freezed after about 2 hours. I am about to back up my computer via time machine after this (hopefully it'll finish before it hard freezes again, I haven't backd up in more than a year). If that doesn't work, I guess I'll have to move folders individually onto an external. I will proceed after backup with a clean install as that is my only other option for now.  
However, after a clean install, should I restore directly from time machine? I would think wiping the hard drive and replacing it with what's on time machine wouldn't solve the problem because the inherent corruption is being restored. However, what about just restoring my User folder? What would the process be for getting everything back to normal as quickly as possible? Do you know of any good ways to get my apps and other preferences back to normal ASAP without corrupting anything? Will I have to re-register anything? For example, I have Adobe CS4 that I received from my highschool IT department. I have since graduated, so I don't have the disc or any of the password codes. Would it be risky to restore the application support folder (because that's where the bug may lie)? Or if I just drag just drag apps, would that still work or is the application support necessary too?

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    [ 11.612] (==) Automatically enabling devices
    [ 11.612] (==) Automatically adding GPU devices
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    [ 11.612] (WW) Disabling Mouse0
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    [ 11.612] X.Org XInput driver : 19.1
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    [ 11.615] Initializing built-in extension MIT-SHM
    [ 11.615] Initializing built-in extension XInputExtension
    [ 11.615] Initializing built-in extension XTEST
    [ 11.615] Initializing built-in extension BIG-REQUESTS
    [ 11.615] Initializing built-in extension SYNC
    [ 11.615] Initializing built-in extension XKEYBOARD
    [ 11.616] Initializing built-in extension XC-MISC
    [ 11.616] Initializing built-in extension SECURITY
    [ 11.616] Initializing built-in extension XINERAMA
    [ 11.616] Initializing built-in extension XFIXES
    [ 11.616] Initializing built-in extension RENDER
    [ 11.616] Initializing built-in extension RANDR
    [ 11.616] Initializing built-in extension COMPOSITE
    [ 11.616] Initializing built-in extension DAMAGE
    [ 11.616] Initializing built-in extension MIT-SCREEN-SAVER
    [ 11.616] Initializing built-in extension DOUBLE-BUFFER
    [ 11.616] Initializing built-in extension RECORD
    [ 11.616] Initializing built-in extension DPMS
    [ 11.616] Initializing built-in extension X-Resource
    [ 11.616] Initializing built-in extension XVideo
    [ 11.616] Initializing built-in extension XVideo-MotionCompensation
    [ 11.616] Initializing built-in extension XFree86-VidModeExtension
    [ 11.616] Initializing built-in extension XFree86-DGA
    [ 11.616] Initializing built-in extension XFree86-DRI
    [ 11.616] Initializing built-in extension DRI2
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    [ 11.638] compiled for 4.0.2, module version = 1.0.0
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    [ 11.638] (EE)
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    [ 11.638] (EE) no screens found(EE)
    [ 11.638] (EE)
    Please consult the The X.Org Foundation support
    at http://wiki.x.org
    for help.
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    [ 11.638] (EE)
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    NVIDIA drivers for linux.
    local/mhwd-nvidia 331.49-1
    MHWD module-ids for nvidia 331.49
    local/mhwd-nvidia-legacy 304.119-1
    MHWD module-ids for nvidia 304.119
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    # nvidia-xconfig: X configuration file generated by nvidia-xconfig
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    Section "ServerLayout"
    Identifier "Layout0"
    Screen 0 "Screen0" 0 0
    InputDevice "Keyboard0" "CoreKeyboard"
    InputDevice "Mouse0" "CorePointer"
    EndSection
    Section "Files"
    EndSection
    Section "InputDevice"
    # generated from default
    Identifier "Mouse0"
    Driver "mouse"
    Option "Protocol" "auto"
    Option "Device" "/dev/psaux"
    Option "Emulate3Buttons" "no"
    Option "ZAxisMapping" "4 5"
    EndSection
    Section "InputDevice"
    # generated from default
    Identifier "Keyboard0"
    Driver "kbd"
    EndSection
    Section "Monitor"
    Identifier "Monitor0"
    VendorName "Unknown"
    ModelName "Unknown"
    HorizSync 28.0 - 33.0
    VertRefresh 43.0 - 72.0
    Option "DPMS"
    EndSection
    Section "Device"
    Identifier "Device0"
    Driver "nvidia"
    VendorName "NVIDIA Corporation"
    EndSection
    Section "Screen"
    Identifier "Screen0"
    Device "Device0"
    Monitor "Monitor0"
    DefaultDepth 24
    SubSection "Display"
    Depth 24
    EndSubSection
    EndSection
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    02:00.0 VGA compatible controller: NVIDIA Corporation G96M [GeForce 9600M GT] (rev a1)
    Subsystem: Apple Inc. Device 00b0
    Kernel driver in use: nvidia
    03:00.0 VGA compatible controller: NVIDIA Corporation C79 [GeForce 9400M] (rev b1)
    Subsystem: Apple Inc. Device 00af
    Kernel driver in use: nvidia
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    Moderators: please leave this open until it is actually resolved.
    Earlier posts:
    Panajev
    Posts: 4
    From: ITALY
    Registered: Oct 14, 2009
    Windows 7 x64, MacBook Pro, frequent CHKDSK after HDD firmware update
    Posted: Nov 2, 2009 6:45 AM
    Hello, I have been having filesystem problems on my Windows 7 partition since the HDD related firmware update (the latest Performance update) was released and installed onto this mid 2009 MacBook Pro.
    The HDD is a 500 GB 7200 RPM model, but it never gave me any troubles under OS X before the "fix" and I know other users had intermittent problems with the HDD on their MacBook Pro's related to the HDD making noises and pausing.
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    Message was edited by: Panajev
    MacBook Pro (2009) Mac OS X (10.6.1) Windows 7 x64, Bootcamp 3.0, recent HDD update
    nicegom
    Posts: 6
    Registered: Nov 12, 2009
    Re: Windows 7 x64, MacBook Pro, frequent CHKDSK after HDD firmware update
    Posted: Nov 12, 2009 1:40 AM in response to: Panajev
    Hi there,
    I have a different experience. I installed Windows 7 before the "performance update 1.0" came out. I actually experienced the chkdsk launch problem with Windows 7. I had done repartitioning and clean-install several times but cannot solve the problem. So I tried to install XP and Vista on my MBA (Mid 2009 with SSD) and found that these two OS doesn't introduce such problem.
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    Cheer,
    Message was edited by: nicegom
    Macbook Air Windows Vista MBA of Mid 2009 with SSD

    Windows 7 x64 all updates
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    [The Chkdsk.exe program does not start correctly on a Windows 7-based computer|http://support.microsoft.com/kb/975778]

  • Mid 2009 MacBook Pro 13 Hard Drive Upgrade Questions

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