Missing Audio from FCP to Soundtrack Pro in Final Cut Studio 2

I've been trying to edit a sequence from Final Cut Pro 6 in Soundtrack 2 by sending the sequence to soundtrack as a multitrack project. For some reason, when I send it, multiple audio files from the original sequence are completely missing, and I have no clue why. They're .mov files from the original import of footage.
Anyone know why these don't transfer and how to fix it?

Hi
I too have had trouble with Audio from FCP 6 messing up in STP 2. My opinion is that the process works if the audio tracks in FCP are either Mono sourced or stereo sourced and are never relinked, split to mono (in the case of stereo files) in FCP during editing. God forbid you unpair a stereo track and delete one channel!
Once in STP I have had occasions where non audio appears, the wrong track appears... or sometimes the wrong audio!
Once in a while double clicking on the offending clip in STP to open it in a Wave window seems to show the right audio. Either saving it of closing the window ( command/w) restores the right material to the clip in STP.
You could right click on the audio in FCP and "send to STP Audio Project". Hopefully the correct audio is opened in STP. Then save it. Now re-export the Multitrack project and see if the audio makes the trip.
Or, you could export the Audio directly from FCP, then import it into STP and position it against the video manually.
One warning : once things start going pear shaped in the FCP-STP workflow, it's my experience that I'm fighting problems all the way. It's why I don't use STP for FCP mixing .... I want to, but its too risky.
I hope V3 is better.
Best
Lee

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So was there a setting for me to choose during Log and Capture that would have made them '1 Stereo' as opposed to '2 Mono'? Or is this a preference setting somewhere to change that for next time? They were recorded on my camera in stereo I'm pretty sure.
Now in terms of the massive project I've already captured and edited, should I be able to export these mono tracks individualy and fix them as needed? When I click the 'Send to' 'Soundtrack Pro Audio Project File' for these single mono tracks it asks me to 'Save' the file somewhere, is there a proper place to do this or just anywhere on the HD?
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