Missing IDOCS with status "qRFC used to send IDoc to SAP system"

We are running ECC6.0 (HR System) and are sending IDOCS to XI (PI7.0 SP10)for mapping before they end up in a 4.7 system.
We have implemented the Queue processing here: /people/community.user/blog/2006/11/04/how-to-serialize-idoc-xml-messages-fed-into-xi
We have two queues set up for different countries (Eurpoean roll out) and they have different Message Types for the same Logical System. 
We have been getting serialitazion issues due to IDOCS not being sent, although they are showing in ECC6.0 as sent, they have not hit XI or subsequently the Target System.
On the whole, this has worked well for a while, but over the last week, something has effected the consistency of the correctly sent IDOCS.  We had an update error with the Update Work Process, which left lots of short dumps, but this was fixed, but since then, we are getting these strange anomalies.
I appreciate this strange behaviour, but has anyone come across this before?
More an SAP than an XI issue, I think....  But as I appeciate your repsonses I added it here!  

Hi Barry,
03 does not mean the idoc is delivered, it does only mean that it was sent to port.
The status that indicates that the idoc was delivered is 12 (idoc dispatched).
For getting this status a report named RBDMOIND has to be run/scheduled.
After this if the status becomes 12 the idoc is delivered otherwise if it is still 3 that means the idoc is still there.
Regards,
Sergio

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