Mov coversion has alot of noise

I am having a bit of a problem when encoding to quicktime mov from premiere, after effects or AME.
The problem being that when I encode a video to quicktime mov but use the h264 codec, the video looks grainy and terrible. Even with everything on max, and using a bit rate of 8000kbps (720P footage)
Yet when I use the H264 option (mp4) and codec with the same settings it comes out beautifully, What is going on?

What platform are you on, Windows or Mac?. I'm on a Mac and get beautiful results exporting to Quicktime ProRes and ProRes HQ (my usual master format). From XDcam, Nikon .mov (with C6), and Canon. Haven't tested with CS6 h264.mov, but worked fine from 5.5. Excellent quality. Exported ProRes HQ and H264 mov's direct from Premiere 5.5 and 6.

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