.mov files won't playback in quicktime 7.2 after archive and install

I just did an archive and install, because I was having a few problems with the Safari beta.
However since doing so it has been a complete nightmare. So many things stopped working. I'm guessing I had them installed on the system and not on my user.
So now after getting most thing back up and running, .mov files won't play in quicktime 7.2 an annoying 3ivx pop up appears which leads to a dead link.
So I checked the .mov format and they are 3ivx, but how do I install and from where do I get the codec??

Perian
http://perian.org/#detail
It's free and most people use this to play off the wall codecs...3ivx.
Please read the information on the web page on how to install and use. In the download there a help page.

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