Multiple audio tracks not showing up on iphone video.

I created my video in iMovie '09 v. 8.0.6
I have two audio tracks, one person talking in the video and another being a background track. The video exports fine. The audio works when I play on the computer and after I have uploaded to my kickstarter site. When I try to play the video back from the kickstarter page on my iphone or ipad it only plays the background music, no audio from the person talking in the video. HOWEVER, if I plug in the headphones and listen it sounds fine.
What is the deal? Is there some setting I am missing when exporting that will allow both audio channels to play on the iphone external speaker?
Thanks.

I was having the same issue too. I was hoping that apple will address this issue with a SW update or at least someone from apple would be kind enough to answer this thread.
After researching for a couple days I found a solution. It's not the most efficient, but it works. You'll need a CD-R or CD-RW with this method. The trick is you need to convert m4p file format to mpa or mp3 file format.
You can follow the following steps:
1. Open iTunes
2. Create a New Playlist: File -> New Playlist
3. Drag the song(s) to the playlist you just created. Note: Depending on the file size you might only be able to burn just 1 song at a time
4. Insert a Blank CD to your disk drive.
5. Right click on the playlist then click "Burn Playlist to Disk." Then click burn. Make sure the Disc format is set to Audio CD.
6. Once the disc is finished, click on the CD in the device section in iTunes. Right click the song and click "Create AAC Version." This will create a .mpa file into your iTunes.
7. Copy that file to your iPhone and you're golden
Hope this helps guys. I know it's not the most elegant solution, but it works and now you can workout with those tunes. I know I've been quite frustrated because my tracks didn't show up, hopefully the new SW update will fix this.
I would appreciate any apple genius' solution that is more efficient as well.
Cheers

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