Music and apps not syncing correctly after updating to iOS 6.1.2

Most of my songs are skipping at random points and some aren't playing at all, and only 2 or 3 play correctly. Also, my apps aren't syncing at all and iTunes keeps saying that they failed to install. Some of the songs skip on iTunes, however most work fine, but it usually only gets really bad when I sync it to the iPod. I've tried removing all the songs from my ipod and re-syncing them about 6 times and i've re-installed iTunes twice, i've also tried restoring my iPod, but nothing seems to be working. Does anyone know how to fix this? I've been trying to fix it for almost a week, and it's only happened since updating to iOS 6.1.2. This has never happened before that.

What happens when you try?
First, try a system reset.  It cures many ills and it's quick, easy and harmless...
Hold down the on/off switch and the Home button simultaneously until you see the Apple logo.  Ignore the "Slide to power off" text if it appears.  You will not lose any apps, data, music, movies, settings, etc.
If the Reset doesn't work, try a Restore.  Note that it's nowhere near as quick as a Reset.  It could take well over an hour!  Connect via cable to the computer that you use for sync.  From iTunes, select the iPad/iPod and then select the Summary tab.  Follow directions for Restore and be sure to say "yes" to the backup.  You will be warned that all data (apps, music, movies, etc.) will be erased but, as the Restore finishes, you will be asked if you wish the contents of the backup to be copied to the iPad/iPod.  Again, say "yes."
At the end of the basic Restore, you will be asked if you wish to sync the iPad/iPod.  As before, say "yes."  Note that that sync selection will disappear and the Restore will end if you do not respond within a reasonable time.  If that happens, only the apps that are part of the IOS will appear on your device.  Corrective action is simple -  choose manual "Sync" from the bottom right of iTunes.
If you're unable to do the Restore, go into Recovery Mode per the instructions here.

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