My apps are not restoring properly?

i recently updated my ipad from iOS 5.0.1 to 5.1. there were some minor glitches at first, and over time, they turned out to become problems.
hence, i backed up my ipad to iCloud and restored my ipad. the glitches were gone but now, my apps are not reinstalling. some are installing, while the other apps just stop installing at a certain point and start installing all over again. the app i need the most restored properly is my note taking app - Notability. i have all my notes on that and i cant afford to lose that data
i also tried syncing all the apps back via iTunes. even then, apps just synced halfway and stopped installing.
when i go to iCloud settings, it says its still restoring the iPad.
am i being paranoid and impatient? is there any way i can safely get all my data back? is it possible that the ipad has not backed up properly to iCloud?
any help is greatly appreciated

I assume that you are familiar with your iPad's portrait orientation lock feature and you have verified your iPhone is not locked in this manner.
In case you're not familiar, please make sure this icon does not appear on your iPad's status bar:
If your iPad is not in portrait orientation lock, then the app developer should be prodded into updating their app to fix this defect.  Generally speaking, the App Store indicates a way to contact the developer to inform them of such defects.

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