My iPhone 4S is not charging when plugged into clock radio. What's wrong?

So about a week ago, I docked my iPhone 4S into my Sony ICF-C7iP clock radio as I do every evening before going to bed. I bought this clock radio back in August and have had no problems with it at all. However this time, I noticed my phone was not charging. It didn't make the charging beep nor did it show on the display that it was charging. I tried removing it & re-seating it...nothing. I tried rebooting my phone which resulted in the same problem. When I plug my iPhone into either a standard sync cable or an iPhone dock, it charges/syncs as normal.
Suspecting the problem was with the alarm clock, I contacted Sony support. The clueless support rep on the other line suggested I return the clock in exchange for a refurbished one. For a $60 clock, this was more trouble than it was worth, so I decided against it.
I then decided to purchase an iHome iA9 which was sure to work. I just unpacked it and set it up. When I docked the iPhone on it...you guessed it...nothing. It is still not charging. The funny thing is that the iPhone will play music through the iHome with no problems. I had also tried plugging the iHome into a different outlet with no luck either. I am out of ideas. I am left to assume that for some reason, my phone does no longer like charging when docked on to an alarm clock.
Does anyone have any ideas or suggestions on how I can get this to work again? I recently upgraded to iOS 5.1 and honestly don't know if that would have anything to do with it. But the likelihood of 2 completely different clock radios exhibiting the same problem is virtually non-existent.
As mentioned, I tried rebooting the phone with no luck. Docking the phone to a standard charging cable plugged into the wall charges the phone fine. Docking the phone on an iPhone compatable dock charges the phone fine. Is the problem with my phone?
Thank you in advance for your assistance!

Tim, I was speaking generally. Obviously the iOS upgrade didn't remove the ability to charge on ALL 3rd party devices, else my iH9 wouldn't charge it either.
What I just can't understand is how an old iHome model works just fine with a new iPhone, yet a new iHome model will not. If anything, I would think it would be the other way around.
Anyway, I emailed iHome explaining my situation and I asked if they had planned on releasing a firmware update to fix the problem. I got the typical generic response about unplugging the iHome & removing the batteries for an hour then trying again. And if that doesn't work, send it in for repair in which I would need to pay for the shipping.
If I decide to go that route, I think it's just going to be a waste of time as I would get the iHome back "repaired" and it would have the exact same problem. But I guess I'll never know until I try.
I remember reading on these forums about several others having the same problem. So what are the odds that the iHomes these other people got who are experiencing the same problem are problematic as well? Unless the "repair" iHome is referring to is a firmware update, I don't really buy into this.

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