My purchased Apps are not synching with iTunes

I have a serious OS crash recently, and I had to reinstall the entire system from a scratch (the hard drives were formatted). Before reinstalling, I deauthorised my computer in iTunes. Then, when my new system was ready, I installed iTunes, and authorised it for my Apple ID. But now I have a synching issue - when I'm connecting my iPhone, iTunes says that this computer is not authorised for the apps that are installed in my iPhone, and asks me to authorise this computer. I click on "Authorise" button, enter my Apple ID and pass. itunes connects to the iTunes Store, and says that this computer is already authorised. But my apps are not transfered! I've tried to transfer them manually, by selecting "transfer purchased items" in the iTunes File menu. But it didn't help me. All that is transfered are my purchased books for iBook app... there is no "Apps" menu in my media libruary in the iTunes top left corner... Is there a way to fix this? I don't want to re-purchase the apps that I've already payed for!
P.S. Sorry if my English is bad - it's not my native language

I've found a solution here http://support.apple.com/kb/TS1389 Problem solved

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Since the apps are showing on the iPhone you might want to review this Knowldge Base article:
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newMacUser09 wrote:
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My purchased Apps are not synching with iTunes

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