My smart mailboxes are not synchronising between my iMac and my Macbook air

Hi, I have an iMac running OS X 10.9.5 and a Macbook Air running OS X 10.9.5. I predominately use my iMac, but when I travel or out of the office I take my Macbook Air. I can see my smart mailboxes on both machines, but the content is missing on the majority of my smart mailboxes on my Macbook Air.
Oddly enough, I recently created a new smart mailbox (in the last three weeks) and the content of this mailbox is synchronised in both machines. I not sure how to fix this so as I have all smart folders synchronised on both machines.
Thanks in advance.
Dolores

Thanks, I knew that though and nothing was happening.
However, since I asked the question my documents have started to sync. No idea why, nothing has changed in my settings apart from a restart of all devices...but it's working so issue solved!
KC

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