Need to force quit programs to shut down or restart

I have an MDD G4 and a G5.
The G5 is smooth as silk– few problems.
I run Tiger on both and Adobe CS2. When I go to shut down or restart I almost always have to force quit the CS2 programs, (as well as other programs like Firefox, mail, text edit), on the G4, almost never on the G5.
I've repaired permissions, downloaded updates to the system, etc.
Could it be a hardware issue as I'm running the same software on my other machine?

I have had problems like this also. I have a Power Mac G5.
I tried to turn on my bluetooth mouse and it worked for a little bit then it froze. I had to restart with another mouse, since then my bluetooth will not open, it freezes when I try, the upper right corner is messed up, the clock does not appear anymore and when I move my mouse up there it shows a spinning icon??? Then when I go to shutdown it will not and shows a spinning icon in the middle of my screen. I have to force quit computer. Everything else seems to be working fine.
I redid my permissions. Any ideas anyone?????

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