New hard drive - wake up from sleep gets "stuck"

My original 80GB drive died, so I replaced my primary hard drive with a new 160GB SATA drive. I just created one big partition and I re-installed OS X 10.3.9 and did all the software updates. The only software installed is Adobe CS2, Flash 8 and MS Office.
Now, any time my iMac goes to sleep, when I wake it up, it gets "stuck" for about 2-3 minutes, then the mouse appears and everything is fine. Why is this happening and how can I fix it?
Stats:
iMac G5 17" 1.6GHz
OS X 10.3.9
160GB SATA
2GB RAM
Nothing external connected (no USB or firewire drives etc).

You did go to System Preferences and open Startup Disk and select your new drive as the startup disk, right?
That shouldn't have anything to do with waking from sleep.

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