New macbook pro, unsupported file error

Hi there,
I've just got my new Macbook Pro, have installed Aperture2 and performed a software update.
I get the 'unsupported file format' message when I import my RAW files. I can see the thumbnail, but no preview is rendered.
I have a Canon 5D MkII camera, for which the RAW update was released months ago, and works fine on my iMac.
The software update only listed the latest two cameras to receive RAW support, a Nikon and an Epsom, if that helps.
Thanks in advance - Chris

http://support.apple.com/downloads/DigitalCamera_Raw_Compatibility_Update_24
this is the update that contains the 5dm2 compatibility ...
http://support.apple.com/downloads/DigitalCamera_RAW_Compatibility_Update_25
this is the one that came out after ...

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<Image Edited by Host to Remove Personal Information>

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Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.6.0/Classes/management-a gent.jar", should be -rw-r--r-- , they are lrw-r--r-- .
Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.6.0/Home/lib/dt.jar", should be lrwxr-xr-x , they are -rwxr-xr-x .
Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.6.0/Home/lib/jce.jar", should be lrwxr-xr-x , they are -rwxr-xr-x .
Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.6.0/Home/lib/management- agent.jar", should be lrwxr-xr-x , they are -rwxr-xr-x .
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Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.6.0/Resources/JavaPlugin Cocoa.bundle", should be drwxr-xr-x , they are lrwxr-xr-x .
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Warning: SUID file "System/Library/CoreServices/RemoteManagement/ARDAgent.app/Contents/MacOS/ARDAg ent" has been modified and will not be repaired.
Permissions verification complete

I did do a search for a similar topic and I did read that some permissions are of no concern. However, like I said the guys at Blizzard said that it could be the source of the issue. Also, like I said, even if I do "repair permissions" and it says that it completes successfully, it has not really done anything. Even if I run verify permissions immediately after, I see the same problems.

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