New messages in Mail vanish

I have Mountain Lion and the latest SpamSieve version. I'm having a problem where I see a new message come in via Apple's Notification center, but then the message disappears from my inbox. Nowhere to be found in any of my folders. The odd thing is looking through SpamSieve's log, there is a record of the message. This has happened on more than one occasion in the last day. Here is a part of the log for a message I saw come in, but then it isn't in Mail:
Predicted: Good (1)
Subject: My resume
From: andrey@******.com
Identifier: Dl0sDjh0Wm/bYbBAFTvdkw==
Reason: (
"Andrey R"
) matched rule <From (name) Is Equal to "Andrey R"> in SpamSieve whitelist
Date: 2012-08-22 00:28:37 +0000
Help?

Anything to help on this page:
http://c-command.com/blog/2012/07/26/mountain-lion-compatibility/
What account type -- IMAP or POP?  Has this changed with ML?
Ernie

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