New motherboard: can it cause any issue with ProApps or Projetcs ?

My iMac G5 Ambiant Light is at the Apple Store to replace the motherboard.
Before the crash, I was working on FCP, DVD Studio Pro, Motion and Color projects.
(Final Cut Studio 2).
Will I have everything back in order after the motherboard replacement?
Anybody has experienced any problem with Pro Apps or projects after a motherboard replacement? Thanks!

Your apps are all on your drives.
The motherboard is not in the equation except it holds the processor and that is not changing, is it?
bogiesan

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    Mike

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