Normal CGI-Executables permission problem? and Executing Binary CGIs?

Running 10.4.7. And we are having the no permission problem when trying to run CGI scripts from within CGI-Executables. I have looked at the httpd.conf file and the line that was supposed to be there is. I also have an alias under the default webserver pointing to it. Any help?
Also, until then, I made a directory under the main website executable and can run perl cgi files. But I get the following error when running the binary file :
Internal Server Error
The server encountered an internal error or misconfiguration and was unable to complete your request.
Thanks,
Corey

Forget the CGI-Executables, the Alias was fritzing it up, and deleted the alias and is working. But I am still having the problem of the binary CGI files. The only difference I have on the web server is entropy's PHP5 is installed, but wouldn't think that would be an issue.
Corey

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