'not compatible with your current codelines' and 'Patch 7461070'

We are trying to upgrade EBS from 11.5.10.2 to R12.1.1 using Maintenance Wizard v2.15, and we are on "Apply Preinstall Patches" for "Perform the Upgrade". We got some strange errors:
(1). AutoPatch error for "Task: Apply Preinstall Patches":
This patch is not compatible with your current codelines.
This patch is compatible with: entity 'xla' - codeline 'R12.XLA.A'.
Your current on-site codeline for the entity 'xla' is: 'R12.XLA.B'.
for "1-Apply patch 6832389 (Required)", "2-Apply patch 6625757 (Required)", "3-Apply patch 6648785 (Required)", "4-Apply patch 6166150 (Required)", "5-Apply patch 6146757 (Required)", "6-Apply patch 6757123 (Required)", "7-Apply patch 6172183 (Required)", "8-Apply patch 6774040 (Required)", "9-Apply patches 6976563 and 7351384 (Conditionally Required)"
(2). Got patch version mismatch errors when applying patch#7461070 for "10-Apply AD 12.1.1 upgrade driver (Required)":
###############################################################################SUMMARY - patchit12.sh - of patch: 7461070, driver: driver=u7461070.drv###############################################################################patchit12.sh - is exiting with no actions. ie. Patch 7461070 not applied.There is a mismatch between the patch version specified and the releaseversion obtained from your Applications environment. In order to applyRelease 12 patches to previous Applications versions, the patch must be applied in preinstall mode.This can be done by passing the appropriate value to the preinstall parameter of eof_patch12.sh.INFO: Not starting patch alert monitor, to start: Login Engineer, User Admin, Update Profile
For first issue:
Verified first 2 patches:
Patch 6832389:R12.AP.A R12: Critical Pre-upgrade for R12
Patch 6625757 6625757:R12.XLA.A
These patches are for 12.0 upgrade, not for 12.1
Why MW is trying to apply these R12.0 patches?
For second issue I found Note 779466.1 Patch 6604842 fails during a R12 Upgrade via Maintenance
Wizard as DB still reports R11i
similar but at 12.0 level.
Shoul all customers follow the workaround and manually apply the patch?

I got similar error:
ACTION: execute on node: apps, patch=7461070, driver=u7461070.drv
patchit12.sh REMOTE SIZE: 53273 LOCAL SIZE: 53273
OK - no update needed for patchit12.sh, same size as on EOF: 53273 bytes.
Found release REL=11.5.10.2 from fnd_product_groups.
WARNING - patchit12.sh has been invoked on a non-R12 Applications system.
SUMMARY - patchit12.sh - of patch: 7461070, driver: driver=u7461070.drv
patchit12.sh - is exiting with no actions. ie. Patch 7461070 not applied.
There is a mismatch between the patch version specified and the release
version obtained from your Applications environment. In order to apply
Release 12 patches to previous Applications versions, the patch must be
applied in preinstall mode.This can be done by passing the appropriate
value to the preinstall parameter of eof_patch12.sh.
INFO: Not starting patch alert monitor, to start: Login Engineer, User Admin, Update Profile
Should patch 7461070 be applied manually?

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