Old SATA Drives in new MacPro

Hello,
I just bought a new MacPro desktop and had an old Dual G5 with two internal SATA drives. (Western Digital factory drives). When I got the new MacPro I took the old hard drives out of the G5 and put them into the MacPro. Now whenever I click on the secondary drive (the old one), I can hear the computer start up the drive, but it takes two to three minutes before the Finder window appears. This occurs any time a program or Finder tries to look inside the old hard drive. A lot of the content on the drive is old Adobe projects (which I know slows the machine already). Is it the hard drive or is it the content on the drive that slows it down?
MacPro 2x3 GHz Dual-Core   Mac OS X (10.4.7)   2 GB 667 MHz DDR2 FB-DIMM

Is it the hard drive or is it the content on the drive that slows it down?
Probably both.
Firstly, as hatter suggests, having a drive filled by more than 80% does lead to performance slowdowns for the drive. Additionally he gives good advice in thinking a repartitioning of the drive along with a zero of the entire drive would probably help.
Secondly, check your Energy Saver preferences. If you are sleeping your drives whenever possible try turning that off. It's a common complaint where if a drive is not used within 10 minutes it spins down causing delays, typically 10-15 seconds, when you do want to access the drive.

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