"On My Mac" saved mail gone since upgrading to Mountain Lion

I upgraded my iMac from Snow Leopard to Mountain Lion this past week. Mail worked fine for a few days and then my Mail Rules and my "On My Mac" saved mail (DECADES worth of mail!!!) disappeared.
I have both a Time Machine backup of my Snow Leopard from right before the upgrade, as well as a SuperDuper clone.
I have already tried the following:
Rebuilding the mailbox (it rebuilt my Inbox, but nothing showed up "On My Mac" and no, nothing is hidden.
Copying the Mail folder from my Snow Leopard backup to my Mountain Lion desktop and copying the .mbox files and associated .plist files for the "On My Mac" saved mail into the "Mailbox" folder in V2 on Mountain Lion. When I then launched Mail it showed "On My Mac" and the names of all of my saved mail folder, but those folders were empty. I attempted to rebuild those folders, but nothing showed up.
Importing the .mbox files from the "On My Mac" saved mail, but it only showed two Sent Items folders as being able to be imported. None of my actual "On My Mac" many saved mail folders.
I could really use some help here. I have already posted on Macintouch and nothing suggested has helped thus far.
I really cannot lose my saved mail. The contents of each of those .mbox saved mail folders absolutely contains my saved email. There are tons of "emlx" files.
Thanks!

Misery loves company. ;-)
Glad you found yours. What did you do to make it show up in Mail again?
I just got off the phone with Apple support and still have no resolution. I got kicked up one level and now that person has to kick it up again because they don't know how to fix my problem. I have been told it could be up to 48 hours until I hear from someone again. Ugh
Your mention of the "archive" folder sent me to look at my mailbox structure.
For some reason, I appear to have 2 mailboxes for my .Mac email (sorry - I still call it .Mac!). I don't know why, and each has 1GB of stuff in it. The first one has an archive.mbox with only a .plist in it. No folders. The other one has neither a .plist nor a folder. The other .mbox stuff has both a .plist and a folder with individual files (emails).
I really shouldn't have to revert to Snow Leopard to get my stuff back. There has got to be a way to have Mountain Lion Mail read my Saved Mail (On My Mac) folder. It's got 3GB of stuff in there.

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