Opening folders after latest Intel update

Tell me... has anyone come across this problem? I just downloaded the latest intel update, and now I can only open my folders by right clicking. I've already made sure the user file wasn't corrupt. Yet, everything else works just fine when I double click. This is driving me crazy. Someone, please help.
MacBookPro   Mac OS X (10.4.9)  

From Macfixit........
Re-apply combo updater for various issues. At the risk of playing like a broken record, we cannot overstate the value of re-applying the Mac OS X combination updater as a solvent for various issues apparent after using the standard, delta (adjacent version-to-version) updater to migrate to Mac OS X 10.4.9. The delta updater is automatically used by Software Update if your current system iteration is 10.4.8. Re-applying the combo updater overwrites potentially problem-causing files that were not replaced by the delta update. Download link is as follows:
http://www.apple.com/support/downloads/macosx1049comboupdateintel.html

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