Partial confirm on customeru2019s order quantity for EDI sales order

Hi All,
  Our company is using ECC 6.0. We seem to having issues with orders coming through EDI u2013 i.e. it will not partially confirm what we have in stocks and just reject the whole line. E.g. If the customer is ordering 300 units for an material and we have 200 units in stocks only, it will zero confirm instead of partially confirm 200 units. If I try to manually key in the same material in the same sales order then it will partially confirm it (I.e. 200 units) instead of zero confirm.
  I have checked the ATP check rules and it seems everything alright. Any idea why this would happen only for EDI orders? Are there any EDI setup that will cause this issue? Any ideas where I can looks for the potential issues might be?
  Thank you.

Evidence,
What happens when you enter the order manually (VA01)?
Best Regards,
DB49

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