Partial Payment (with invoice reference) for Invoice-based items

Hi Gurus,
I'd like to make partial payments to credit memos while "Include partial payment" is activated.  However, if i activate "Include partial payment, partial payments for invoice-based items are no longer possible (partial payment amount is displayed only, and full amount is automatically applied).
My credit memos were posted via BAPI_ACC_DOCUMENT_POST.  I've read that when using BAPI, invoice reference field is automatically populated with "V".   
Can you please enlighten me what is SAP's logic behind this.  How does SAP determine invoice-based items?  And is there a workaround so I could still make partial payment while it is activated?  Thank you.
Regards,

Hai Dianne,
Check it once OBA4 & OBA4 t.codes both are Tolerance Group
Regards
Madhu I

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