Playlist not updated after music was deleted

I have been wanting to delete my music from my iPhone, so I turned to this iExplorer software which lets you access the iPhone's root directory. I managed to find the folder which the music was stored in, which was "/Root Directory/User/Applications/Media/iTunes_Control/Music" , where I found several folders named FXX (e.g. F01, F27), and in each of them there were some music files whose names were all four characters and was some jumbled up combination of text and numbers (e.g. G8J1). Listening to all the files, I realised those were all the music that my iPhone contained, so I proceeded to delete all the FXX folders. However, when I tried to open up my iPod, the track list and playlists remain intact. When I selected any track, it would then randomly jump to about 2-4 other tracks without playing them and then returning to the song list. When I tried to sync the phone with new songs in my iTunes, it would just start and finish syncing without doing anything. So how do I clear the track list of the songs that are not there anymore and also how should I get my iTunes to sync with my iPhone?
Other things to note:
- When I went to the "About" section under Settings > General, it still says that I have songs inside the phone
- When I double press the home button and slide to the right to show the music player, when I press Play, similarly, it just jumps through about 3-4 tracks then stops doing anything.

Restore it from a backup, or purchase it again, or fill out and submit this form for iTunes Store music. If the music came from CDs, reimport those CDs.
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