Please help me diagnose and fix my SDD problem

I have a mid-2011 MacBook Air (13 in) – 1.7 GHz Intel Core i5, 120GB SDD, and 4GB RAM – running Yosemite 10.10.2.
I noticed recently that I had approx 38 GB available of the 120 GB SSD and 82 used (Finder and Disk utility numbers agree). However, when I added the "Get info" numbers of the sizes of the folders contained in the Mac HD volume the total was approximately 58 GB, and that was what the finder was telling me the day before.
I ran Disk utility to verify the disk, it could not do so. It could not repair the disk either (I think the file system exit code was 8). I rebooted holding down "r" and after  a couple of tries, that Disk utility app did repair the disk and Disk utility now verifies the disk. However, it shows that 82 GB of the SDD are used and 38 GB are available. The SDD has only one partition (startup partition) and in Disk utility the partition layout shows one partition but only about 4/5 of the layout box is shaded in blue – the bottom 1/5 is white.
The computer seems to be running OK.
I have a SuperDuper clone that I can boot and run from (it is 53 GB). It shows my 120 GB Mac HD contains 82 GB with 38 GB free space. I made the clone after I noticed this problem.
The graph of storage from "About this Mac" showing the internal SSD and the SuperDuper clone are below. The size of the "other" segment in the internal SDD seems to correspond to the difference between the missing – unrecognized – space on my internal SDD and what should be shown as available.
Do I need to run recovery (power up + r)? And if I do that do I need to restore files and apps from a Time Machine backup? Should I restore with the SuperDuper clone? If I wait until a 10.10.3 update, might that fix the inconsistency? What's your advice?
Thanks in advance - Jogfather 

only about 4/5 of the layout box is shaded in blue – the bottom 1/5 is white
I think you're misinterpreting: there are not 2 partitions: the blue represents the part of the patron that is full, and the white represents the free space (on the same partition).

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