Please interpret PPBM to explain my encode/export problem

I've posted my PPBM "Output-MPE" file below, which I hope you can read and relate to my problem in the previous thread:
http://forums.adobe.com/thread/718736?tstart=0
My system seems very close to "Stephen Wong 5.0.2" in the PPBM5 results spreadsheet, but my numbers are almost all worse than his.  My system is also similar to "AG-Edit2", "DJ DVC custom", and "NG neebster", and many of my numbers are better than theirs except the Disk I/O score.
I just don't get it--why would it take so long before encoding and exporting any type of video file from a timeline even as small as 100 or 200 clips!
Here is my "Output-MPE" file:
M-Driver;Personal or Computer ID
Gigabyte;Computer Manufacturer
X58A-UD3R;Computer Model
400;secs Total Benchmark Time
;Performance index
184;secs AVI  Encoding Time
97;secs MPEG Elapsed Time
107;secs H.264 Elapsed Time
12;secs Rendering Time
;MPE off result
;MPE result
;MPE gain
Intel;CPU Manufacturer
i7-930;CPU Model
2.80;GHz CPU speed
1;Number of CPU chips
4;Total Number of Cores
12;GB RAM
5.02;Version 25 PPBM5 multitest
GTX 470;Graphics Board
Win 7 64 ;OSVersion
SATA;OS Disk Interface
1000;GB OS Disk Capacity
7,200;OS Disk Speed
SATA;Project Disk Interface
1000;GB Project Disk Capacity
7,200;Project Disk Speed
Same as Project;Output / Preview Disk Interface
Same as Project;GB Output / Preview Disk Capacity
Same as Project;Output / Preview Disk Speed
;Comment

Ooooh oooh ooooh!  Problem solved!
I tried opening a big sequence in AME without using Premiere, and I could actually see this message as it was taking forever to encode:
"Adobe Premiere processing audio source for (clip name)"
It seems to try to process audio for every single clip in the sequence before encoding video.  I realized it was because I'd put 32kHz clips in a 48kHz sequence.
I unticked the "export audio" box and then it started encoding immediately and exported in seconds.  Then I put over 2000 clips in a correctly formatted audio sequence and it encoded video and also exported the audio immediately.
Sorry for the wild goose chase.
And Bill, I'd actually tried your tuning tips (in addition to Black Viper's), and it was yours I tried to do most of but then backtracked a little to keep the fancy new Apple-like interface.
When I have some more time, I'll play around more with PPBM5 and try to optimize and perhaps ask for your advice.

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