.plist files not recreated

I have had to remove and reinstall Final Cut Express 4 as well as LiveType. Files pursuant to http://www.fcpbook.com/Misc1.html were deleted. I also removed the associated .App files. Prior to the reinstall, permissions were verified and / or repaired on the disk with both the Mac OX-X native Disk Utility and Disk Warrior. The system was rebooted after the reinstall.
There are now two issues:
(1) When the program was reinstalled, at no time was I prompted for the Serial Number, yet it was present when relaunched. So I missed some files but unsure as to which ones.
(2) A new .plist file is not being created when either of the applications above are launched.
Any idea what is going on here?
Thank you!

Then something has happened to the permission and or attribute settings on your folders to mark files saved in them as hidden.
Try this Terminal command to show all files and you can turn it off by changing the true to false at the end of the command.
defaults write com.apple.finder AppleShowAllFiles -bool true
If you then see your files tere is a problem with files being market as hidden when they are saved. Create a New Folder in the Root of the drive and look at its Get Info window and post a screen shot of it in this thread.

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