Power Mac G4 MDD - Has difficulty booting after shut down

I have a Power Mac G4 MDD (1.25Ghz) that is having issues when it is shut down. The power button on the front of the machine does not start the computer every time. Sometimes it works, sometimes I need to wait a while before it will work. When the button is pressed, it does not light up or anything.
I have noticed that if I sleep the computer it always seems to wakeup when the front button is pressed. But if I shut down the G4, is does not always bootup.
I have also performed multiple restarts when performing software updates, and they always seemed to work fine.
I have changed the Saft battery inside - it was at about .4v
I have performed a CUDA/PMU reset using the button on the motherboard, and followed the Apple procedure. (disconnect power, and accesories, press reset button, wait 10 seconds, reconnect, restart) It did not restart right away, had to wait 20 minutes or so.
The G4 has a new installation of Tiger, with all of the updates.
I have not checked the PSU, but plan on doing that soon. Just seems odd that it only has issues when the machine was shutdown. Seems to start after it sits for a while, but last night I was switching monitors, and shut it down, switched monitors, and it would not re-boot.
Any ideas?

With the "sometimes" nature of the problem, it could be the front panel board, a much cheaper replacement than a PSU. An Apple tech told me that one way to test the front panel board was to find one of the first Apple USB keyboards for the original iMac. The early ones have a power button like the old ADB boards that overrides the internal board/button. He said that, should the Mac start reliably from the old keyboard, then there is trouble with the front panel board. The Apple model number for the USB board with power button is M2452.
Very helpful forum member japamac has a test procedure for the MDD PSU on his site here:
http://jcsenterprises.com/Japamacs_Page/Blog/D275729F-09DA-4FBB-96B3-BEEEB2C0461 9.html
You'll need a multimeter to check the voltage levels.

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