PP Hangs When Moving Between Timelines

I posted this question earlier so here is some more info so hopefully someone can tell me what is going wrong.
I am working on a project that is going to be on youtube in HD. I have several AE animations that are rendered as .mov (Apple Pro ResHQ). I have about 30 -40 pieces of narration in .wav format (done in soundbooth). The problem is that when I move from the main sequence timeline to the preview timeline, when I want to cut a piece of audio and insert it, the system hangs for about 4 seconds and then I can continue. I have noticed that it only stalls if I touch the timeline scrubber. i can insert the audio into the timeline, and even move it around, but once I grab the scrubber the thing locks for a few seconds, then if I go up and grab the scrubber on the preview window it does the same thing. The project settings are HDV at 24fps.
This does not happen when I am working on an SD project at all, and my Mac is plenty powerful enough to edit this.
Here is my specs
Mac Pro (Mid 2009)
16GB Ram
640GB Hard Drive (450GB Free)
1TB 7200rpm Hd (599GB Free)
Nvidia Gt 120
Preimere Pro (latest version with update)

Luke,
There's a couple of things I might ask.
the HDV - is it Adobe HDV or Apple HDV? Final Cut Pro captures a different kind of HDV and is a different codec. It's a weird little thing that a lot of people don't know about. If so, you might want to check out how to make a custom preset in Premiere Pro. The super short version is go to a 'desktop' mode in the settings and choose the Apple HDV codec.
You say the latest version, but unless someone says CS4, I don't know it. Can you please confirm that it is CS4? The reason why this is important is that you state that you have 16GB of RAM which is fabulous. Unfortunately, unless you're using CS4, Premiere Pro won't see it.
Typical things to try is to clean your database cache (in media prefs) and trash your Premiere Pro prefs (user>documents>Adobe>Premiere Pro>4.0)
Hope this helps,
Dennis

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PP Hangs When Moving Between Timelines

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