Premiere Pro CC Cutting off frames and shifting audio from .MOV

Hi everyone! I recently converted from Premiere Pro CS6 to CC. I've noticed an incredibly frustrating problem that I can't diagnose. In CS6 my Quicktime files would come in just fine, with correct audio lining up. However in Premiere Pro CC, the first two frames are cut off and the audio is shifted forward.
I only have one machine: a 2009 MacPro, with the only main upgrade being a Nvidia 680.
Here are the two files in question if anyone wants to see what I am running into:
https://www.dropbox.com/sh/1xaez5axno7ntq5/AADUybHCiJsGMgj-ZpqMGFvga?dl=0
These files are coming out of our 3D software, Blender. Yes they're half 1920x1080 - they are preview renders and not final.
Any help would be appreciated

Camtasia http://forums.adobe.com/thread/836800 may help
-and Lagarith Codec http://forums.adobe.com/thread/1287577
-and http://forums.adobe.com/thread/775288
-and http://forums.adobe.com/thread/453044
-and http://forums.adobe.com/message/3202148

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