Problems opening PDFs created with Acrobat in TFS

Hi,
I know this might not really be a supported issue, but any thoughts you might have would be appreciated!
I've been creating PDFs using Primo PDF and a trial of Acrobat X. I then put them on TFS / MS Visual Studio 2000.
So, when I try to open a PDF I've checked in, the ones I've created in Primo are fine and launch whereas the ones created in Acrobat won't open and an error message about Inconsistent Line Endings is displayed.
It says:
"The line endings are not consistent. Do you want to normalize them....
Line ending: Windows (CR LF)"
The PDFs DO work when I open them from the normal place in the windows file system. However, when I try to "normalize" them by clicking yes, it breaks them completely.
Does anyone have any idea why this is happening and what I can do to fix it? I'm assuming it must be something to do with the conversion or document settings, because this only happens to PDFs created with Acrobat.

In Acrobat X, SharePoint Integration has been added which allows users to check-out/check-in the document from within Acrobat. Clicking the file from document library in Internet Explorer opens the file in Acrobat. The configuration that needs to be done on the SharePoint server is explained in the following KB article in section 11.1.
http://kb2.adobe.com/cps/837/cpsid_83709/attachments/Acrobat_Enterprise_Administration.pdf
Please try these and let us know if you face any problems after this.

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