Problems with Syncing two different libraries on one mac

Ever since I downloaded itunes 11 onto my mac I am having problems with syncing.  We have two libaries on our mac and can still easily move between the two, each keeping our own playlists, and music/podcast libaries.  The problem is with the syncing to our ipods. The playlists stay separated, but unfortunately the sync update pulls both music libraries and puts it on each of our ipods.  Having very different music tastes, this is a drag. 
A second issue - there is still that problem of having issues with purchased music not staying in playlists (on ipod) after syncing.
I've tried looking around the itunes tutorials and articles but wasn't having luck.  any feedback would be greatly appreciated.
Oh, in case it matters, one of us is using an Iphone and the other an ipod touch.

you might have to find a third party program to get those songs off her ipad onto the computer, apple doesnt support that unless they are purcahsed from itunes store because of DRM (Digital Rights Media) another word for copy write. so theres not a whole lot of hope for that, but you can always create a new user on your computer
>user>+ icon>Create new user make it admin
-if they are how ever purchased from itunes you would still make that new user, plug the device into itunes and authorize the computer by clicking store on the top of your screen where file edit and view are, Store>authorize this computer
once thats done you'll then plug that device in to the computer and on the left side of itunes you'll see devices and "Device name" the device its self, right click or control click the name and choose transfer purchases, anything that has ever been purchased of gotten for free will sync onto the computer,
you cant just simplay pull the songs off the device to the computer, doesnt work like that

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