Raw files in an event in iPhoto are not present in master file?

Hi all,
I keep my raw files in an external drive in iPhoto (9.5.1) library. I decided to move my library to Lightroom 5.7 via duplicating the master file of the corresponding event in iPhoto and taking this duplicate out of the iPhoto library conclusively to move to Lightroom. This worked perfectly but later I realised that two of my event files are not present in the master file. When I open iPhoto I can see and play around with these events of raw files with no problem at all.
- I searched through the each and every master file sub directory but couldn't find them.
- I used spotlight and could only find the .jpg versions of these raw files. I never converted them to jpgs before.
- The only difference from other events that I can think of is these two event files contain more than 1000 raw photos while the others contain less than 1000. 
Running OS X 10.9.5. Any help would be appreciated.

When I open iPhoto I can see and play around with these events of raw files with no problem at all.
Select one of the photos from these events in iPhoto and use the command "File > Reveal in Finder > Original file".
Does this show the folder with the missing RAW files?
To migrate your original files to Lightroom you might consider to select the photos in iPhoto and to use the command "File > Export ". This way, iPhoto will find the originals for you, and it will be safer. You can be sure, that all selected photos will be exported, and you do not risk to corrupt your iPhoto library.

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