Record Separate Audio to our webinar, then use that in final - Sync Problem

Hi,
We do Gotowebinar Webinars and I have been recording the audio separately because the quality is much better.
Problem is when I drop it in to final cut, it doesn't stay in sync. I have tried the adjust the speed of the audio and can get it when it starts in sync and ends in sync, but the middle is all over the place.
Anybody got any ideas. I'm recording the audio on my mac coming right out of our mixing board.
The webinars are always an hour long.
Thanks
Rich

Run the audio out of the mixing board back to the camera.
I run 3 channels into the mixer and 2 out to the cam.
Channel 1 - lav mic on speaker
Channel 2 - short shotgun aimed at speaker (in case the lav fails and it also add nice depth)
Channel 3 - longer shotgun aimed at audience to pick up questions
Someone runs the board to adjust 2 & 3 as appropriate.
Channel 1 goes into the camera as Left
Channels 2 & 3 are mixed and go in as Right
Capture as dual mono. It's all in sync.
As an added twist - I'll run a lead out to a computer and capture live. If I have a hiccup, I can go back to the camera media. Otherwise I'm ready to edit the minute the talk is over.
x

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