Remote not working with MBP lid closed

My MBP OSX 10.8.2 is plugged in using the charger and connected via an HDMI adapter to my TV.  Apparently, the MBP will work in clamshell mode only if connected to a display and connected to a
The Apple TV remote controller works fine if the lid is open at a distance of 15 feet.  Once the lid is closed, however, the remote controller stops working.  It was working fine previously.  The remote works fine with other appliances and applications, such as Apple TV as well as the MBP when the lid is open, so I believe the batteries are fine.
Any help would be most appreciated.  Thank you.

What does it do when you connect it back up and turn it on, what screen do you get etc.

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