Renaming Servers in CR Server XI R2

Hi,
Currently, the cms name and the machine name are different. We copied over the vmware that had CR Server XI.
First time I ran it, everything works fine. CMC and InfoView comes up fine. However, when I tried to run a report, I get an error saying that input server is down.
I have experienced this problem in BOE. I simply create another CMS that matches the machine name and I do the same for other server.
However, I can't do this on CR Server because of it's single server installation. Is there a way to rename the servers so that they match the machine?
Thanks,
Tim Kang

Also I noticed when I go to check rights for this report object and select Administrator, this user comes up with
View objects that the user owns    - - Denied
Edit objects that the user owns    - - Denied
Modify the rights users have to objects that the user owns    - - Denied
Delete objects that the user owns    - - Denied
Delete instances that the user owns    - - Denied
View document instances that the user owns    - - Denied
Pause and Resume document instances that the user owns    - - Denied
Securely modify rights users have to objects that the user owns.    - - Denied
Reschedule instances that the user owns    - - Denied
This seems very unusual for a brand new installation, where I had not changed any of the default rights.
Anyway i went into the rights assigment for Administrators and changed
View objects that the user owns   
         Edit objects that the user owns   
         Modify the rights users have to objects that the user owns   
         Delete objects that the user owns   
         Change password for users that the user owns   
         Copy objects that the user owns to another folder   
         Subscribe to publications the users that the user owns   
         Securely modify rights users have to objects that the user owns.   
         Schedule on behalf of other users that the user owns   
from not specified to Granted, but this still did not help

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