Retina macbook pro slow boot up and shutdown?

I have a Macbook Pro with retina display (2.6/16/512) and it's just 2 weeks old. When i first got it bootup and shutdown times were pretty awesome (Below 15 seconds for cold bootup and 5 seconds for shutdown). Now after installing many applications (final cut pro, aperture, logic pro, adobe master suite [photoshop, illustrator etc.] and few other apps) my computer seems slow both when booting up (25 seconds) and shutting down (31 seconds), it doesn't seem right to me as the rMBP uses an all flash architecture and is supposed to be fast in booting up and shutting down. Now shutting down took longer than booting up (which is kinda wierd) and sometimes when shutting down the menubar on top is still visible even though the screen had gone to the white image. Can anyone provide any explanations or suggestions to remedy this issue? Thanks in advance.

I am experiencing the same problem - except my Boot time is over a minute!!!  - When I received it I was amazed at the boot time speed in comparison to my old MacBook Pro 17" - I've noticed the machine has become increasingly more sluggish when using certain applications such as Photoshop and  RapidWeaver.
Reinstalling Mountain Lion had no real affect in improving the situation - I do have large Aperture Libraries - and use Creative Suite 5 reguarly.
Would be happy for some advice on what maybe the issue. - I am bit dissapointed at this point - Spending that much money on a machine that I bought for the performance boost and now that has slowed right down isn't sitting right with me.

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      MacBook Pro - model: MacBookPro10,1
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      8 GB RAM Not upgradeable
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      BANK 1/DIMM0
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      Bluetooth: Good - Handoff/Airdrop2 supported
      Wireless:  en0: 802.11 a/b/g/n
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      OS X 10.10.1 (14B25) - Uptime: 2 days 12:3:50
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      Recovery HD (disk0s3) <not mounted>  [Recovery]: 650 MB
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      [not loaded] com.Belcarra.iokit.USBLAN_usbpart (2.0.2) [Support]
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      [loaded] com.google.keystone.agent.plist [Support]
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    17/01/14 19:16:36,691 SystemUIServer[163]: Cannot find executable for CFBundle 0x7f8eda014960 </System/Library/CoreServices/Menu Extras/Clock.menu> (not loaded)
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    17/01/14 19:16:36,710 com.apple.audio.DriverHelper[173]: The plug-in named BluetoothAudioPlugIn.driver requires extending the sandbox for the IOKit user-client class IOBluetoothDeviceUserClient.
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    17/01/14 19:16:36,958 com.apple.SecurityServer[15]: Session 100006 created
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    17/01/14 19:16:37,051 com.apple.IconServicesAgent[198]: IconServicesAgent launched.
    17/01/14 19:16:37,204 WindowServer[98]: **DMPROXY** (2) Found `/System/Library/CoreServices/DMProxy'.
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    17/01/14 19:16:37,325 WindowServer[98]: Received display connect changed for display 0x4272900
    17/01/14 19:16:37,326 WindowServer[98]: Found 1 modes for display 0x04272900 [1, 0]
    17/01/14 19:16:37,326 WindowServer[98]: Received display connect changed for display 0x3f003d
    17/01/14 19:16:37,326 WindowServer[98]: Found 1 modes for display 0x003f003d [1, 0]
    17/01/14 19:16:37,326 WindowServer[98]: Received display connect changed for display 0x3f003e
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    17/01/14 19:16:37,356 SystemUIServer[163]: *** WARNING: -[NSImage compositeToPoint:operation:fraction:] is deprecated in MacOSX 10.8 and later. Please use -[NSImage drawAtPoint:fromRect:operation:fraction:] instead.
    17/01/14 19:16:37,356 SystemUIServer[163]: *** WARNING: -[NSImage compositeToPoint:fromRect:operation:fraction:] is deprecated in MacOSX 10.8 and later. Please use -[NSImage drawAtPoint:fromRect:operation:fraction:] instead.
    17/01/14 19:16:37,498 WindowServer[98]: Display 0x04272900: Unit 0; ColorProfile { 2, "Color LCD"}; TransferTable (256, 12)
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    17/01/14 19:16:37,540 WindowServer[98]: Display 0x04272900: Unit 0; ColorProfile { 2, "Color LCD"}; TransferTable (256, 12)
    17/01/14 19:16:37,557 com.apple.SecurityServer[15]: Session 100010 created
    17/01/14 19:16:37,593 com.apple.SecurityServer[15]: Session 100011 created
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    17/01/14 19:16:37,737 Messages[155]: Chat history path /Users/RakRobert/Library/Containers/com.apple.iChat/Data/Library/Messages/Archi ve Status: 2 totalExpected: 0 countProcessed: 0, forcing an import.
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    17/01/14 19:16:38,479 com.apple.time[149]: Interval maximum value is 946100000 seconds (specified value: 9223372036854775807).
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    <NSKeyValueObservationInfo 0x7fa759da1620> (
    <NSKeyValueObservance 0x7fa759da15b0: Observer: 0x7fa759da03c0, Key path: uidNext, Options: <New: NO, Old: NO, Prior: NO> Context: 0x7fff8db9744b, Property: 0x7fa759d62830>
    17/01/14 19:16:38,556 com.apple.internetaccounts[197]: An instance 0x7fa75b84c900 of class IMAPMailbox was deallocated while key value observers were still registered with it. Observation info was leaked, and may even become mistakenly attached to some other object. Set a breakpoint on NSKVODeallocateBreak to stop here in the debugger. Here's the current observation info:
    <NSKeyValueObservationInfo 0x7fa75b84cb20> (
    <NSKeyValueObservance 0x7fa75b84c9b0: Observer: 0x7fa75b81df00, Key path: uidNext, Options: <New: NO, Old: NO, Prior: NO> Context: 0x7fff8db9744b, Property: 0x7fa759d62830>
    17/01/14 19:16:38,599 sandboxd[217]: ([128]) ntpd(128) deny file-read-data /private/var/run/resolv.conf
    17/01/14 19:16:38,651 sandboxd[217]: ([128]) ntpd(128) deny file-read-data /private/var/run/resolv.conf
    17/01/14 19:16:38,867 Dock[162]: CGSGetWindowOwner
    17/01/14 19:16:38,867 Dock[162]: CGSGetWindowBounds
    17/01/14 19:16:38,867 Dock[162]: CGSSetWindowToReleaseBackingOnOrderOut: Invalid window 0xffffffff
    17/01/14 19:16:38,867 Dock[162]: CGSGetWindowOwner
    17/01/14 19:16:38,867 Dock[162]: CGSGetWindowBounds
    17/01/14 19:16:38,999 VDCAssistant[224]: AVF encoder error: fail to create accelerator instance
    17/01/14 19:16:39,390 com.apple.dock.extra[208]: <NSXPCConnection: 0x7fdfc5812770>: received an undecodable message (no exported object to receive message). Dropping message.
    17/01/14 19:16:39,434 usernoted[179]: Connection does not have the proper entitlement (com.apple.developer.notificationcenter-identifiers) to connect on behalf of com.apple.appstore. All communication will be denied.
    17/01/14 19:16:39,440 usernoted[179]: Connection does not have the proper entitlement (com.apple.private.notificationcenter-system) to connect to the system notification center. All communication will be denied. center com.apple.storeagent
    17/01/14 19:16:39,000 kernel[0]: CODE SIGNING: cs_invalid_page(0x1000): p=246[GoogleSoftwareUp] final status 0x0, allow (remove VALID)ing page
    17/01/14 19:16:39,627 com.apple.launchd.peruser.501[146]: (com.apple.iTunesHelper.199968[248]) Spawned and waiting for the debugger to attach before continuing...
    17/01/14 19:16:39,671 com.apple.launchd.peruser.501[146]: (com.google.GoogleDrive.199616[249]) Spawned and waiting for the debugger to attach before continuing...
    17/01/14 19:16:39,685 com.apple.launchd.peruser.501[146]: (com.hegenberg.BetterTouchTool.116896[251]) Spawned and waiting for the debugger to attach before continuing...
    17/01/14 19:16:39,734 WiFiKeychainProxy[236]: [NO client logger] <Aug 30 2013 23:40:46> WIFICLOUDSYNC WiFiCloudSyncEngineCreate: created...
    17/01/14 19:16:39,734 WiFiKeychainProxy[236]: [NO client logger] <Aug 30 2013 23:40:46> WIFICLOUDSYNC WiFiCloudSyncEngineRegisterCallbacks: WiFiCloudSyncEngineCallbacks version - 0, bundle id - com.apple.wifi.WiFiKeychainProxy
    17/01/14 19:16:39,908 BetterTouchTool[251]: init
    17/01/14 19:16:39,909 Google Drive[249]: PyObjCPointer created: at 0xa0f69418 of type {__CFBoolean=}
    17/01/14 19:16:39,910 Google Drive[249]: PyObjCPointer created: at 0xa0f69410 of type {__CFBoolean=}
    17/01/14 19:16:39,913 Google Drive[249]: PyObjCPointer created: at 0xa0f69420 of type {__CFNumber=}
    17/01/14 19:16:39,913 Google Drive[249]: PyObjCPointer created: at 0xa0f69430 of type {__CFNumber=}
    17/01/14 19:16:39,914 Google Drive[249]: PyObjCPointer created: at 0xa0f69440 of type {__CFNumber=}
    17/01/14 19:16:40,335 mDNSResponder[70]: mDNS_Register_internal: ERROR!! Tried to register AuthRecord 00007FDDED819160 Raks-MacBook-Pro.local. (AAAA) that's already in the list
    17/01/14 19:16:40,335 mDNSResponder[70]: mDNS_Register_internal: ERROR!! Tried to register AuthRecord 00007FDDED8195F0 A.B.7.F.F.3.E.F.F.F.D.6.8.A.A.6.0.0.0.0.0.0.0.0.0.0.0.0.0.8.E.F.ip6.arpa. (PTR) that's already in the list
    17/01/14 19:16:40,335 mDNSResponder[70]: mDNS_Register_internal: ERROR!! Tried to register AuthRecord 00007FDDEC806160 Raks-MacBook-Pro.local. (Addr) that's already in the list
    17/01/14 19:16:40,335 mDNSResponder[70]: mDNS_Register_internal: ERROR!! Tried to register AuthRecord 00007FDDEC8065F0 227.1.168.192.in-addr.arpa. (PTR) that's already in the list
    17/01/14 19:16:40,991 iTunes[159]: ApplePushService: APSConnection being used without a delegate queue
    17/01/14 19:16:41,000 kernel[0]: CODE SIGNING: cs_invalid_page(0x1000): p=263[ksadmin] final status 0x0, allow (remove VALID)ing page
    17/01/14 19:16:41,169 Google Drive[249]: GsyncAppDeletegate.py : Finder debug level logs : False
    17/01/14 19:16:41,000 kernel[0]: CODE SIGNING: cs_invalid_page(0x1000): p=266[ksadmin] final status 0x0, allow (remove VALID)ing page
    17/01/14 19:16:41,411 com.apple.InputMethodKit.UserDictionary[268]: -[PFUbiquitySwitchboardEntryMetadata setUseLocalStorage:](760): CoreData: Ubiquity:  RakRobert~E043868B-B172-537B-971F-E284B30E4D30:UserDictionary
    Using local storage: 1
    17/01/14 19:16:41,481 com.apple.InputMethodKit.UserDictionary[268]: -[PFUbiquitySwitchboardEntryMetadata setUseLocalStorage:](760): CoreData: Ubiquity:  RakRobert~E043868B-B172-537B-971F-E284B30E4D30:UserDictionary
    Using local storage: 0
    17/01/14 19:16:42,725 Finder[164]: Loading Google Drive Finder extension
    17/01/14 19:16:42,726 Finder[164]: GDMenuHandler instantiated
    17/01/14 19:16:49,867 parentalcontrolsd[285]: StartObservingFSEvents [849:] -- *** StartObservingFSEvents started event stream
    17/01/14 19:16:55,000 kernel[0]: SMC::smcReadKeyAction ERROR: smcReadData8 failed for key B0PS (kSMCKeyNotFound)
    17/01/14 19:16:55,000 kernel[0]: SMC::smcReadKeyAction ERROR: smcReadData8 failed for key B0OS (kSMCKeyNotFound)
    17/01/14 19:16:55,770 distnoted[292]: assertion failed: 13B42: liblaunch.dylib + 25164 [FCBF0A02-0B06-3F97-9248-5062A9DEB32C]: 0x25
    17/01/14 19:16:56,001 com.apple.SecurityServer[15]: Session 100003 created
    Thanks a lot!
    <Email Edited By Host>

    Hi RobertRak
    I can only say I have a Samsung SSD 840 EVO 1TB installed in my MacBook Pro 17”. Speeds are exquisite: Write: 479.1MB/s Read: 508.9MB/s
    Like Melophage, I left the Optical drive in place.
    My only thought for your case is to check firmware of the Samsung SSD drive.
    Samsung SSD website: http://www.samsung.com/global/business/semiconductor/samsungssd/downloads.html
    I think i used DiskUtility to clone the ISO to USB flashdrive or CD-RW. It was a challenge to get the Mac to boot from their DOS, but once successful you should get to the latest firmware. The Samsung needs to be in the internal SATA connection.
    Be aware that the POST check your Mac does on startup will always take time. Depends on amount of RAM, how long your other internal spindle drive takes to get to speed and unpark the heads etc.
    Can't say i've counted the boot time on mine. I know it's quicker now since putting the SSD in.
    You will need at least 10% free space left on the boot SSD too BTW.
    Hope this assists.
    From System Information:
    Intel 6 Series Chipset:
      Vendor: Intel
      Product: 6 Series Chipset
      Link Speed: 6 Gigabit
      Negotiated Link Speed: 6 Gigabit
      Physical Interconnect: SATA
      Description: AHCI Version 1.30 Supported
    Samsung SSD 840 EVO 1TB:
         Capacity: 1 TB (1,000,204,886,016 bytes)
         Model: Samsung SSD 840 EVO 1TB                
         Revision: EXT0BB0Q
         Serial Number: XXXXXXXXXXXXXXXX    
         Native Command Queuing: Yes
         Queue Depth: 32
         Removable Media: No
         Detachable Drive: No
         BSD Name: disk0
         Medium Type: Solid State
         TRIM Support: No
         Partition Map Type: GPT (GUID Partition Table)
         S.M.A.R.T. status: Verified

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