Running CS6 and keep getting pop-up asking "Where is Adobe Photoshop?"

I'm currently running CS6 on Mac OS 10.7.4 through a subscription. Previously I was using CS5.5. Before installing CS6 I ran the Adobe uninstaller that came with CS5.5 to remove it. Now, while using CS6 apps I often get a pop-up window come up asking me "Where is Adobe Photoshop?" This is also happening with Illustrator and InDesign. It may happen with all of them, but as of yet I haven't seen it with any others (95% of the time I'm in one of those 3 apps).
The pop-up window shows the question at the top, and then displays a list of all the applications on my computer below it. Each time it comes up I select the right app and hit OK. Sometimes it seems satisfied by my resposne, but sometimes it'll come up again specifically asking for the CS5.5 version a well. To this question I once again select the CS6 version as the CS5.5 version is no longer installed. This also seems to satisfy it for the time being, but at some point in the future this sequence will start up all over again (maybe after every launch of the app?)
Can someone please give me some pointers on how to get rid of this issue? Next time it comes up I'll take some screen shots and post them here.
Thanks

You will be able to open the application natively from Applications folder , however you would be facing the issue when opening the file directly by double-clicking on them.
If my presumption is right , then it is the file association issue . You can Ctrl+Click on any file say INDD , PSD etc and then Go to "Get Info"
Change the "Open with " to the application you want to open it with , Click on "Change All" button just underneath it. and then check

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