Running Perl prog on command line and through Con Program output varies.

Hi,
We have perl program which takes a text file and converts it into Excel sheet.
We run this perl program through Host file.
In the host file we have
export PERL5LIB=
$DGC_TOP/bin/Make_Excel_Detail.pl $5 > $6 2> $7
When we run this through command line in linux it work properly.
But the same host program through Concurrent request has total numbers mismatch.
Any input.
Thanks,

Program accepts standard text file and converts it into excel sheet.
When we run the program in linux command line it gets all the 3000 lines.
But the same program through concurrent request, gets only 2900 lines.
What we noticed is the missing lines have some special characters like £bacs, BACS €111.
Thanks.

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