Scratching sounds on Quicktime movie but not on iMovie

I was wondering why, when I listen to the video on iMovie, does it sound fine but save with these loud scratching noises. There's absolutely no reason for it. It's off a new CD. It doesn't do it when I'm watching on iMovie. But when I save it and open the Quicktime movie there's loud scratching noises... What is that?

Sorry to make it look like advertisement, but I copied a small part of the video.
http://s109.photobucket.com/albums/n50/TripPix_2006/Personal/?action=view&curren t=scratches.flv
It scratches three times, mostly in the second half of the video. I'm not sure if it's because the video is overloaded. It just seems to do this on THIS video and none of my other ones. The size of the iMovie file is 2.62 GB so that might be a reason, but I'm hoping it's something fixable.
Any help would be great. Thank you.

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