Several apps not opening (Bouncing on task bar for less than one sec. and quitting)

I've tried repairing permissions using disk utility, it doesn't do anything when I go into safe mode, and I can't update from 10.9.4 because of this. I run boot camp, but I doubt this is a problem with that, since it happened recently. It's an 11 inch macbook air that I purchased in 2011. Serial Number  C2*******TJY
I had the hard drive replace with an OWC aura, but the problems  started occurring after that as well. Could anyone give me any tips on how to fix this? A variety of other apps aren't opening as well, and they're all native to the Os like photobooth.
MacBook Air, OS X Mavericks (10.9.4)
<Edited By Host>

Do a backup. Boot to the Recovery Volume (command - R on a restart or hold down the option key during a restart and select Recovery Volume). Run Disk Utility Verify/Repair and Repair Permissions until you get no errors. Then re-install the OS.
OS X Recovery
OS X Recovery (2)

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