SharePoint Environment Suggestion

Hi,
We have about 2000 users and each user has a site collection and they upload documents to their site collection.  
So we have 2000 site collections under one web application and it is becoming tedious for maintaining purposes.
We are planning to migrate to SharePoint 2013 from 2010 and looking for new ways to maintain the documents which they have already uploaded.
What are our options going forward? Can we have one site collection with 2000 document libraries, one for each user? And get rid of the 2000 site collections?

SharePoint is primarily collaboration platform where a team or group of team will work together for a purpose and mature the content over the time.
The way your current environment is configured, it seems no user is work with another user. It's kind if their own world where not much collaboration occurs.
If that is the case, then I will suggest you to look for "One drive for business"/Mysite solution. Let user migrate/sync their on document. User will have their own site collection admin rights and no one can interfere with each other.
But if these all site collection need to be merged and meta-tag properly to have intelligent search then I will suggest to do a brainstorm session to finalise  content structure. Think from the permission and backup/restore or content database perspective.
Each subsite can have their 3 default security group (owner/member/visitor) if permission broken but you can easily form a hierarchy. If you go with document library/folder then it will be massive again.
 Hope this will help you a bit.
please 'Propose as answer' if it help you, also vote this as helpful if you like this reply.

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    Please remember to mark the replies as answers if they help, and unmark the answers if they provide no help. If you have feedback for TechNet Support, contact
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