Shut down notification won't appear = can't turn off my mac

Hey,
When I click the apple logo to shut down, log off, or restart my iMac the notification (saying Cancel or Shut Down) won't pop up. The only way I can shut off my computer is with the button. I've done a fresh install and it worked but then when I brought my time machine backups back on the problem came back. Also I just installed Lion and the problem remains. Please help!

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