Size of Index file grew after changing 0 to #Missing. - ETL is SLOW

The size of my Index and Page files are listed below prior to making changes to my lowest level information from zeros to #missing.
Index 4,161,568,768 KB
Page 18,088,920,784 KB
The size of my Index and Page files are listed below after making changes to my lowest level information from zeros to #missing.
Index 7,249,969,152 KB
Page 19,160,917,392 KB.
(There has been some additional information added as well to increase the page files)
Is this causing my ETL to slow down?
My ETL process took about 10 minutes, now it is taking about 40 minutes?
Could this be the cause?
If so, how do I correct this problem?
Thank you,

How do I do that?
Is it doing a calc on the dimensions that I affected?
The only way that I know of doing a restructure is to add an account in the outline. I am not adding any accounts, so I am not sure how to restructure.
Can you point me to the right direction to this?
Thank you,

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