Skipping problems when 2nd audio is added

I have a problem of movies skipping and long beachball delays when adding transitions etc. if I have two audio tracks installed.
This even happens on small 15min. movies, but only when I add a second audio track.
All is normal until I add an audio track and at the point when the track starts to play.
I did not experience this with iMovie5 or before.
I have 1gb ram with 18gb free on system disk and working from external 500gb Lacie FW800.
The two 512mb memory sticks are Apple and system profiler says all is OK.
I repair permissions twice a week, run Disk Warrier once a week and Tech Tools every two weeks.
My OSX system is always current.
example:
I start movies with about 15min. clips & photos. All is well.
When video is done then I add music from iTunes. When the movie arrives at the music it begins to skip and jump.
Also, if I add a transition it takes about 12 to 20 seconds to finish while I watch the ball.
I have cleared the system of all active applications just to see if ram is being used meaning I might need more than 1gb.
Doesn't matter if I have 0 or 5 active in the background ... same problem
When I finally get a project done and burn to DVD it plays just fine without skips.
Harold

I need to clarify my initial description when I used the term "skips".
In reality I am experiencing pauses.
The movie does not skip to another location, but rather pauses both video and audio during play on iMovie only.
It takes a very long time to edit just 20 min. due to this problem.
The burn is just fine.
Harold

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