SL Time machine after disk change, SL and firefox freezes, no logout

I got a new hard disk, which was replaced at an original Apple service point. I restored my system from Time Machine using the SL DVD. Now the system freezes randomly, firefox, thunderbird, even iTunes freeze. The spinning ball appears. I am able to force them to quit, but the whole system does not work properly anymore. I cannot log out or shut it down. I have to press the power button.
I checked all disk permissions and the disk itself. I even tried to reinstall SL over the existing system, to keep all my programs, but this does not help. What should I do?

Thank you Eric for your fast answer.
this worked and now I have a running SL system. I guess I try to install maverics first and then use the emigration assistent to recover my data.
Still its a pitty that the time machine backup didn't do what it was supposed to. The workarround is very timeconsuming and leaves some concerns about my data and the future safety of time machine backups.
Regards
Thorsten

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