Slit Scan looks fine in Motion preview but not when I Export to Movie

I have a project that I finally got to look exactly the way I wanted, but when I export it to a Quicktime Movie, it's all messed up. I used the Slit Scan filter on a PSD image for the background, and it looks great in the preview in Motion, but when I go to export it, the top half and the bottom half alternately drop out to black. I've tried every setting I can think of but nothing changes it. I've tried several different export options as well, but no luck. I'm up against a hard deadline and I just can't get it to work. Anyone have any ideas?

Thanks for your reply, Ben.
The render settings are:
Resolution: Dynamic and Full
Quality: Best
Lighting on
Shadows on
Reflections on
Frame Blending on
In the export settings, I typically just leave everything as current settings, and use canvas settings, but I've tried changing everything and nothing makes any difference. I posted it to YouTube if you'd like to see what the problem is. The link is:
http://youtu.be/oL3Mx5yGKVs
You can see at about the 3 second mark that the Castle logo with drop shadow is on a black background. The background isn't ever supposed to be black, and isn't in the canvas window. It's supposed to vary from light gray, to yellow and white, but never black. There is also supposed to be a white horizontal glow that spans the width of the frame right about the center, and that has just dropped out completely. The top also drops to black and shouldn't. Any help you can give is greatly appreciated.

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Re: Spry menu look fine in Firefox, Safari but not Intenet Explorer
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