Slow boot up time MacBook pro 20mins+

My 2012 13inch macbook pro is taking about 20-30mins booting up before I can open any application or folder. Once it's done loading I can open an application and everything is fine then it randomly slows down and freezes/loads for 30sec to 5mins. I have lots of free ram and my cpu usage is low. I don't have any application to launch on boot up. I have about 300gb free on the hdd.
I have booted into recovery mode and used to disk utility to repair the disk and it says it ok. When I relaunched it seemed slightly faster but still took around 15min to boot.
I'm thinking the hdd is failing but the disk utility says its ok.
Is there anything else i can try? Or should I just go ahead and replace the hdd?

It certainly sounds as if your hard drive is failing... same thing when you boot into Safe Mode (holding down the Shift key whilst booting)?
If you have an Apple Store or an AASP close by, I would make a genius bar appointment and have them diagnose the problem. If it is your drive you can, of course, just replace it yourself. But I, too, would suspect a failing hard drive with the kind of behavior that you're experiencing.
Good luck,
Clinton

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    Report generated 4/19/15, 9:28 PM
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    Click the [Click for support] links for help with non-Apple products.
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    Disk Information: ℹ️
        TOSHIBA MK5055GSXF disk0 : (500.11 GB)
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            Recovery HD (disk0s3) <not mounted>  [Recovery]: 650 MB
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        Apple Inc. Built-in iSight
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        [running]    com.trusteer.rapport.rapportd.plist [Click for support]
    Launch Daemons: ℹ️
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        [running]    com.app4mac.CheckUpAgent.plist [Click for support]
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    Back up your Mac if you have not done so already. To learn how to use Time Machine read Mac Basics: Time Machine backs up your Mac - Apple Support.
    Update OS X. Version 10.10.3 is the current release. To learn how to update OS X read Update OS X and App Store apps on your Mac - Apple Support.
    Remove the following garbage from your Mac.
    "MacKeeper"
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    "Trusteer Rapport"
    Your Mac cannot operate properly with those products installed.
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    Uninstall Norton Internet Security for Mac
    Removing Symantec programs for Macintosh by using the RemoveSymantecMacFiles removal utility
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    http://www.trusteer.com/support/uninstalling-rapport-mac-os-x
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    "App4Mac" is outdated and obsolete.
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