Slow "fast" Computer

Hello all,
I currently have a 15" mid 2012 Macbook Pro, 2.3Ghz i7, 8Gb of RAM, and a 750GB 7200RPM Hitachi HD.
Recently in the past two months I have noticed the computer getting sluggish, I actively monitor the systems performance and have not noticed any hardware bottlenecking, so I did not give it much thought until about a month ago when various applications started crashing randomly; particularly, safari, mail, and final cut pro. I decided to update to Mavericks to see if that would fix things, but in the past week the problem has gotten worse. Now safari will crash, and in the process of restarting it the computer will freeze up and I will have to restart the machine. To me, it does not seem like the hardware is the issue, so is there anything I can do to check the software? Would reinstalling the OS from scratch help? Any advice would be appreciated.
Just to give you an idea of the hardware usage, the processor will never go above 10% usage unless I am rendering a video. The RAM normally has about 2GB free and about 1.8GB inactive. My Hard drive is about 50-80% full normally.
Thought I doubt it matters, the motherboard was replaced in march due to a bad sound processor.
Thank you,
Tim

Have you updated Photoshop to the latest release?  Ther was a problem early on with the Smudge Tool but it has long since been solved.
Choose Help - Updates in Photoshop.
-Noel

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