Small caps display as squares when exporting to PDF

Hello friends
I am using Indesign CS2. I've finished formatting my book and tried to export it to PDF.
It has all worked beautifully, with one snag: every font that was in small caps has displayed as squares.
If I change the style from small caps to "normal" or "all caps" then it displays in PDF correctly, even though it is the same font, same size etc.
Thing is, I really want to use small caps to differentiate my chapter headings as I think it looks stylish.
Can anyone tell me what I am doing wrong?
Helena

Hi Peter
I've removed all the small caps and replaced them with all caps in a different font. It looks fine. Problem solved!
There is something even more pressing on me now --- Indesign is refusing to change a style.
The footnotes text is too small, so I want to change it up from 8pt to 9pt.
OK easy, I hear you say! Just go to paragraph styles> footnote> edit style> change the font size from 8 to 9. Well I did that 3 hours ago and have been fighting with it ever since.
Now I am going to have to highlight each and every one of the 650 footnotes and apply 10pt to them. If I had known 3 hrs ago that I was going to spend 3 hours fiddling, I would have spent that time changing the footnotes one by one.

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Small caps display as squares when exporting to PDF

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